Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919964.1_cds_XP_016469147.1_61715
CDS Infomation

[gene=LOC107791572] [db_xref=GeneID:107791572] [protein=probable pectate lyase P59 isoform X2] [protein_id=XP_016469147.1] [location=join(15874..16073,16182..16496,16569..17160,17927..18154)] [gbkey=CDS]
Sequence

ATGGGAGGACCTAAGTTAATGTATTCGTTCTTCTTTCTATTTATCATTTTTGCTACAATA
ATACCGTGCCTAATGGCTCACATTGGTGACTTCGACGAGGTGTGGCGGAGGAGAGCCGAA
GAAGCTAGAGAATACGCCCGTCAGATTTATGAGCCCAACCCTGAAAATGTCACCCTTGCA
TTTAACCAGAAAGTTCGCGATATGAAGGAAGTGACAGTTAGCAATAATAGCACAAGGAGG
GGTCTAGGGACGAAAAAGTACAAAGGACCTTGCATGGTCACAAATCCAATTGATAGGTGC
TGGAGATGTGACCCTAATTGGGCTGACAATAGGAAAAGGCTAGCAGATTGTGCAATGGGC
TTTGGATCCAAGGCCACCGGTGGGAAGGATGGCGAAATCTACATCGTCACCGACAATTCA
GACGATTATGCTGAACCAAAACCTGGAACTCTTCGTTATGCCGTTATCCAAAAGGAGCCA
TTGTGGATCATATTCGAAAGAAGTATGACCATCAGGTTACACCAGGAGCTGATAATGCAG
AGTGACAAGACTATCGATGCTCGTGGGGCTAACGTTCATATTGCTAAAGGTGCTGGCATT
ACCCTCCAGTACATCAAGAACGTGATCATCCACGGACTCCATATTCATGACATTGTCGAA
GGAAGTGGTGGGATGGTTCGTGACGCAGTGGACCATATTGGCATACGTACCGTTAGTGAT
GGAGATGGCATTTCTATTTTTGGTGCCTCCAATATATGGATTGATCATGTCTCTATGAGG
AAATGCTATGATGGAATCATAGACGCTGTGGAAGGATCCACTGCTATCACTATATCCAAT
GGACATTTCACTGATCATAATGAGGTCATGTTGTTTGGTGCAAGTGACAGTTCTTCAATA
GATCAAGTTATGCAAATCACATTAGCTTTCAATCATTTTGGAAAGAGATTGGTGCAGAGA
ATGCCAAGGTGCCGATGGGGATATATTCATGTTGTTAACAATGACTATACTCACTGGAAT
ATGTATGCCATTGGTGGTAGCATGCATCCCACTATCATTACCCAGGGTAATCGTTTTATT
GCCCCTCCTGACATCTTCAAGAAACAGGTAACAAAGAGGGAGTACAACCCAGAAGAAGTG
TGGAAGCACTGGACATGGAGATCAGAGGGAAATCTATTCATGAATGGTGCATACTTCATT
GAATCTGGTGATCCAGATTGGTCCAAGAAACACAAAGAGCTTTATGACGGAATATCAGCT
GCCCCAGCTGAAGAAGTCACTTGGATAACTAGATTTGCAGGTGCACTTGGCTGCAAAAAA
GGAAAGGCTTGTTAA

Peptide Sequence

PEP ID

XP_016469147.1
PEP Infomation

PREDICTED: probable pectate lyase P59 isoform X2 [Nicotiana tabacum]
Sequence

MGGPKLMYSFFFLFIIFATIIPCLMAHIGDFDEVWRRRAEEAREYARQIYEPNPENVTLA
FNQKVRDMKEVTVSNNSTRRGLGTKKYKGPCMVTNPIDRCWRCDPNWADNRKRLADCAMG
FGSKATGGKDGEIYIVTDNSDDYAEPKPGTLRYAVIQKEPLWIIFERSMTIRLHQELIMQ
SDKTIDARGANVHIAKGAGITLQYIKNVIIHGLHIHDIVEGSGGMVRDAVDHIGIRTVSD
GDGISIFGASNIWIDHVSMRKCYDGIIDAVEGSTAITISNGHFTDHNEVMLFGASDSSSI
DQVMQITLAFNHFGKRLVQRMPRCRWGYIHVVNNDYTHWNMYAIGGSMHPTIITQGNRFI
APPDIFKKQVTKREYNPEEVWKHWTWRSEGNLFMNGAYFIESGDPDWSKKHKELYDGISA
APAEEVTWITRFAGALGCKKGKAC

Transcript Sequence

Gene sequence data has not been registered.